BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C04LP1|AL428349
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1406 1745 0.0
>3x_Contig1406
Length = 8172
Score = 1745 bits (879), Expect = 0.0
Identities = 898/903 (99%), Gaps = 2/903 (0%)
Strand = Plus / Minus
Query: 1 gatcatcttaaattcctatttacaatattcattttacttaaaaatataccgagaggacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7007 gatcatcttaaattcctatttacaatattcattttacttaaaaatataccgagaggacag 6948
Query: 61 aaatagagtagatacgaaaagattagtaggtaccgctgcctctgacccatgtacaattgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6947 aaatagagtagatacgaaaagattagtaggtaccgctgcctctgacccatgtacaattgc 6888
Query: 121 tgggtaaaacacgcttaatccttgtacaaaccataagtttgtttagctttccatacttca 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6887 tgggtaaaa-acgcttaatccttgtacaaaccataagtttgtttagctttccatacttca 6829
Query: 181 aatcttgatctctgttgcaattcggccatcttactatggtagaaaccattgttgtgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6828 aatcttgatctctgttgcaattcggccatcttactatggtagaaaccattgttgtgggag 6769
Query: 241 ttgtcggaagttccatcacttctaatgacagaaccgatactcataaataggccaaaagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6768 ttgtcggaagttccatcacttctaatgacagaaccgatactcataaataggccaaaagtg 6709
Query: 301 gcagcagaaccagcgatgtactgccctaaggttctcacaaacccgtttggacctgggcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6708 gcagcagaaccagcgatgtactgccctaaggttctcacaaacccgtttggacctgggcct 6649
Query: 361 tgtgtaacaatggcaacaccaccgaataagatgccagttcaaacaccaacggtagtaccc 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6648 tgtgtaacaatggcaacaccaccgaataagatgccagtacaaacaccaacggtagtaccc 6589
Query: 421 atcatcaaacccatcttgaacttttcccagttcgaaggttgttgttgttggccgtaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6588 atcatcaaacccatcttgaacttttcccagttcgaaggttgttgttgttggccgtaaact 6529
Query: 481 tttggtggtggtggcatttctggttcaagtcgtggttcgtgttatctgtgcgcgcgttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6528 tttggtggtggtggcatttctggttcaagtcgtggttcgtgttatctgtgcgcgcgttag 6469
Query: 541 tcttggatgtctggaaagagagcgagaccctggttaattccgttacgttttgtggagttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 tcttggatgtctggaaagagagcgagaccctggttaattccgttacgttttgtggagttg 6409
Query: 601 gtcgttcatacatttggtacagtaatttgattcttttttctagtttgaaaacttcgaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 gtcgttcatacatttggtacagtaatttgattcttttttctagtttgaaaacttcgaaaa 6349
Query: 661 tttcgattcgagtccgatttgatgtgactttgaagttcagacgagaaaactgcctaaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6348 tttcgattcgagtccgatttgatgtgactttgaagttcagacgagaaaactgcctaaagg 6289
Query: 721 tcagtcttggacagcgccattggccgtagtaggttgttaaagctttatcttttttaatat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6288 tcagtcttggacagcgccattggccgtagtaggttgttaaagctttatcttttttaatat 6229
Query: 781 atactaacagttgatctttctgctttgaaagcttcgaagttgcaatgatatttgggaggk 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6228 atactaacagttgatctttctgctttgaaagcttcgaagttgcaatgatatttgggaggt 6169
Query: 841 tgcttgtgagaaatttggc-acgaaatgcgatgtattgcaggktcttcgagagagagggt 899
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 6168 tgcttgtgagaaatttggcaacgaaatgcgatgtattgcaggttcttcgagagagagggt 6109
Query: 900 tgg 902
|||
Sbjct: 6108 tgg 6106
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7089
Number of Sequences: 1807
Number of extensions: 7089
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)